Re the boot-time scan:
You are saying it is back (but I can't see any instances of Win32:Trojan-gen on the logs), but this on is in restore point, which was possibly placed there when dealing with the original infection and from the actions you have deleted it (which is fine when dealing with a suspect/infected restore point)
C:\System Volume Information\_restore{DC918390-1AB6-42D3-95D0-6A159150E971}\RP710\A0089552.exe|>[PECompact] is infected by Win32:Rootkit-gen [Rtk], Deleted
Re: the Full System scan:
C:\WINDOWS\PEV.exe|>[PECompact] [L] Win32:Rootkit-gen [Rtk] (0)
There is another topic started by 'oldman' (another malware removal specialist) about PEV.exe and the suspicion is that this is a false positive, try a forum search for pev.exe.
This however is Win32:Rootkit-gen [Rtk] and not Win32:Trojan-gen that your topic Subject implies (and not in either log), so are there any other instances of avast detections of Win32:Trojan-gen ?