It is exceedingly rare where malware will jump drives, all I can think of is that the registry was changed in some obscure place to disable the CD/USB
Sanitise the USB's with this
Download
McShield to your desktop and install
It will initially run a scan and show the result as a toaster by the system clock
Then in the control centre select scanner and tick
unhide items on flash drivesPlug in the drive and McShield will start a scan
Then get the log which will be here :
Start > all programs > MCShield > logs > all scansAnd post that