I think having win98 doesn't help there is no easy way to kill a process (especially as it isn't displayed), as Igor said the resident processes aren't disabled (I assume they aren't unloaded just don't scan) so it makes it easier to resume/start again.
I've just noticed that Stom is 'Using Win98SE, Avast 4.6.665' I doubt that it would resolve this but Stom should update to 'Avast 4.6.691.