Well first you don't mention the site, change the http in the url to hxxp, to avoid accidental exposure.
Ensure that you are using the latest version of Joomla as old version are vulnerable and being exploited.
You will also have to change and passwords, ftp, control panel, etc. Any template files should also be checked as this is a common means of spreading it to new pages, etc. You will have to look for script tags containing obfuscated javascript and remove those tags or upload clean versions after you have taken care of any software updates, etc. You should also speak to your Host.