After looking into the issues you mentioned I deleted the references to the offending site from the Main index template within Wordpress. I also removed all other themes as it seems they had the same problem, and I'm not using them. Also I am already running the latest version of WP 2.7.1, and changed my passwords.
I felt that would put an end to the problem but I still have the same problem, and following what one post said I tried using Blacklist Doctor, and it said the problem was still there.
Could anyone help determine my next course of action, currently I'm downloading my files by ftp so I can run a scan on them. Keep in mind that I am not web savvy, but great with computers otherwise.