Hmmm, I hadn't thought about Windows compressing files...
Funny thing though, last night after I posted this I ran the same scan just for $hit's-n-giggles, and I got the normal amount scanned: 64.9 Mb's!
I'm starting to think that perhaps I pushed a button and just forgot about it. I will monitor the situation to be sure.
On the 2nd thing, I just noticed that when the scan runs, sometimes where it show's the percentage (%) completed, it always shows 0 till it's done. Does that happen to anyone else?